STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000012486Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.923
ENSGAGP00000015915
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.916
UBXN2A
UBX domain protein 2A.
     
 0.913
SPATA5
Spermatogenesis associated 5.
    
 0.881
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 0.881
FAAP100
FA core complex associated protein 100.
    
 0.860
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.860
NSFL1C
NSFL1 cofactor.
     
 0.852
UBXN1
UBX domain protein 1.
     
 0.851
UBXN6
UBX domain protein 6.
    
 0.842
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.