Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP3 | CASP7 | ENSGAGP00000021424 | ENSGAGP00000013610 | Caspase 3; Belongs to the peptidase C14A family. | Caspase 7; Belongs to the peptidase C14A family. | 0.849 |
CASP3 | CASP9 | ENSGAGP00000021424 | ENSGAGP00000009292 | Caspase 3; Belongs to the peptidase C14A family. | Caspase 9; Belongs to the peptidase C14A family. | 0.967 |
CASP3 | PARP1 | ENSGAGP00000021424 | ENSGAGP00000013130 | Caspase 3; Belongs to the peptidase C14A family. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.975 |
CASP7 | CASP3 | ENSGAGP00000013610 | ENSGAGP00000021424 | Caspase 7; Belongs to the peptidase C14A family. | Caspase 3; Belongs to the peptidase C14A family. | 0.849 |
CASP7 | CASP9 | ENSGAGP00000013610 | ENSGAGP00000009292 | Caspase 7; Belongs to the peptidase C14A family. | Caspase 9; Belongs to the peptidase C14A family. | 0.915 |
CASP7 | ENSGAGP00000034513 | ENSGAGP00000013610 | ENSGAGP00000034513 | Caspase 7; Belongs to the peptidase C14A family. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.856 |
CASP7 | PARP1 | ENSGAGP00000013610 | ENSGAGP00000013130 | Caspase 7; Belongs to the peptidase C14A family. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.956 |
CASP9 | CASP3 | ENSGAGP00000009292 | ENSGAGP00000021424 | Caspase 9; Belongs to the peptidase C14A family. | Caspase 3; Belongs to the peptidase C14A family. | 0.967 |
CASP9 | CASP7 | ENSGAGP00000009292 | ENSGAGP00000013610 | Caspase 9; Belongs to the peptidase C14A family. | Caspase 7; Belongs to the peptidase C14A family. | 0.915 |
CASP9 | ENSGAGP00000034513 | ENSGAGP00000009292 | ENSGAGP00000034513 | Caspase 9; Belongs to the peptidase C14A family. | Uncharacterized protein; Belongs to the peptidase C14A family. | 0.967 |
CASP9 | PARP1 | ENSGAGP00000009292 | ENSGAGP00000013130 | Caspase 9; Belongs to the peptidase C14A family. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.939 |
CHD1L | PARP1 | ENSGAGP00000019575 | ENSGAGP00000013130 | Chromodomain helicase DNA binding protein 1 like. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.948 |
CHD1L | XRCC6 | ENSGAGP00000019575 | ENSGAGP00000023956 | Chromodomain helicase DNA binding protein 1 like. | X-ray repair cross complementing 6. | 0.765 |
ENSGAGP00000034513 | CASP7 | ENSGAGP00000034513 | ENSGAGP00000013610 | Uncharacterized protein; Belongs to the peptidase C14A family. | Caspase 7; Belongs to the peptidase C14A family. | 0.856 |
ENSGAGP00000034513 | CASP9 | ENSGAGP00000034513 | ENSGAGP00000009292 | Uncharacterized protein; Belongs to the peptidase C14A family. | Caspase 9; Belongs to the peptidase C14A family. | 0.967 |
ENSGAGP00000034513 | PARP1 | ENSGAGP00000034513 | ENSGAGP00000013130 | Uncharacterized protein; Belongs to the peptidase C14A family. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.975 |
HPF1 | PARG | ENSGAGP00000014651 | ENSGAGP00000026670 | Histone PARylation factor 1. | Poly(ADP-ribose) glycohydrolase. | 0.550 |
HPF1 | PARP1 | ENSGAGP00000014651 | ENSGAGP00000013130 | Histone PARylation factor 1. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.957 |
PARG | HPF1 | ENSGAGP00000026670 | ENSGAGP00000014651 | Poly(ADP-ribose) glycohydrolase. | Histone PARylation factor 1. | 0.550 |
PARG | PARP1 | ENSGAGP00000026670 | ENSGAGP00000013130 | Poly(ADP-ribose) glycohydrolase. | Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. | 0.949 |
page 1 of 3