STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000014882Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
ENSGAGP00000023277
Uncharacterized protein.
 
  
 0.938
ENSGAGP00000015149
Uncharacterized protein.
    
 0.863
ENSGAGP00000010102
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.859
ENSGAGP00000010113
CBS domain-containing protein.
  
 
 0.859
OAT
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.853
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.849
ENSGAGP00000008381
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.839
ENSGAGP00000020204
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.839
ENSGAGP00000023843
Uncharacterized protein.
    
 0.836
AGMAT
Agmatinase; Belongs to the arginase family.
    
 0.829
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.