STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF7DDB1 and CUL4 associated factor 7. (342 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.959
ENSGAGP00000008711
Uncharacterized protein.
   
 
 0.913
ENSGAGP00000015171
Protein kinase domain-containing protein.
   
 
 0.913
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
   
 
 0.913
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
     
 0.900
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.890
HIPK2
Homeodomain interacting protein kinase 2.
   
 
 0.848
DDA1
DET1 and DDB1 associated 1.
    
  0.839
ENSGAGP00000018407
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.835
RBX1
Ring-box 1.
     
 0.817
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.