STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000015881KRAB domain-containing protein. (86 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
  0.829
ENSGAGP00000013961
Uncharacterized protein.
    
  0.659
ENSGAGP00000013963
Ig-like domain-containing protein.
    
  0.659
ENSGAGP00000011886
Keratin_2_head domain-containing protein.
  
 
  0.582
BARD1
BRCA1 associated RING domain 1.
    
  0.520
YTHDC2
YTH domain containing 2.
    
  0.489
SUFU
Suppressor of fused homolog.
    
  0.483
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
  0.480
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.480
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.478
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.