STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000017047CARD_2 domain-containing protein. (894 aa)    
Predicted Functional Partners:
IFIH1
Interferon induced with helicase C domain 1.
    
 0.932
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.925
DHX58
DExH-box helicase 58.
    
 0.922
STING1
Transmembrane protein 173.
    
 0.920
NLRX1
NLR family member X1.
     
 0.913
DHX33
DEAH-box helicase 33.
    
 0.904
DDX58
DExD/H-box helicase 58.
    
 0.897
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.895
ENSGAGP00000007080
MATH domain-containing protein.
    
 0.894
ENSGAGP00000009577
RING-type domain-containing protein.
    
 0.894
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.