STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP6D1MAP6 domain containing 1. (125 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
  0.777
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.777
OIT3
Oncoprotein induced transcript 3.
    
 0.657
PODXL2
Podocalyxin like 2.
    
 0.641
ENSGAGP00000002625
Ig-like domain-containing protein.
    
  0.624
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.624
ENSGAGP00000013961
Uncharacterized protein.
    
  0.616
ENSGAGP00000013963
Ig-like domain-containing protein.
    
  0.616
WDR90
WD repeat domain 90.
    
 0.610
ENSGAGP00000024176
Uncharacterized protein.
    
 
 0.575
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.