STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BEND7BEN domain containing 7. (369 aa)    
Predicted Functional Partners:
BEND6
BEN domain containing 6.
      
 0.568
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.559
SMIM12
Small integral membrane protein 12.
      
 0.558
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
      
 0.558
OTOL1
Otolin 1.
      
 0.557
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.557
ANGEL2
Angel homolog 2.
      
 0.556
SHLD1
Shieldin complex subunit 1.
      
 0.551
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
   
  
 0.445
TATDN3
TatD DNase domain containing 3.
      
 0.432
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.