STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM82Transmembrane protein 82. (304 aa)    
Predicted Functional Partners:
ENSGAGP00000021141
Uncharacterized protein.
      
 0.563
NTAN1
N-terminal asparagine amidase.
      
 0.561
SH3BP4
SH3 domain binding protein 4.
      
 0.559
CEP78
Centrosomal protein 78.
      
 0.559
CEP41
Centrosomal protein 41.
      
 0.557
ENSGAGP00000024429
Uncharacterized protein.
      
 0.555
SNPH
Syntaphilin.
      
 0.553
FAM131C
Family with sequence similarity 131 member C.
      
 0.459
FBLIM1
Filamin binding LIM protein 1.
      
 0.455
ZNF638
Zinc finger protein 638.
      
 0.436
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.