Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGO2 | ENSGAGP00000021506 | ENSGAGP00000004761 | ENSGAGP00000021506 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Uncharacterized protein. | 0.598 |
ENSGAGP00000017897 | ENSGAGP00000019974 | ENSGAGP00000017897 | ENSGAGP00000019974 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like domain-containing protein. | 0.953 |
ENSGAGP00000017897 | ENSGAGP00000021506 | ENSGAGP00000017897 | ENSGAGP00000021506 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.493 |
ENSGAGP00000017897 | ENSGAGP00000023227 | ENSGAGP00000017897 | ENSGAGP00000023227 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Pyrin domain-containing protein. | 0.460 |
ENSGAGP00000017897 | ENSGAGP00000028873 | ENSGAGP00000017897 | ENSGAGP00000028873 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like domain-containing protein. | 0.913 |
ENSGAGP00000017897 | GAS7 | ENSGAGP00000017897 | ENSGAGP00000032617 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Growth arrest specific 7. | 0.448 |
ENSGAGP00000017897 | UBA52 | ENSGAGP00000017897 | ENSGAGP00000001883 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.947 |
ENSGAGP00000017897 | UBE2L5 | ENSGAGP00000017897 | ENSGAGP00000021852 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin conjugating enzyme E2 L5; Belongs to the ubiquitin-conjugating enzyme family. | 0.771 |
ENSGAGP00000017897 | ZFAND4 | ENSGAGP00000017897 | ENSGAGP00000014905 | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | Zinc finger AN1-type containing 4. | 0.753 |
ENSGAGP00000019974 | ENSGAGP00000017897 | ENSGAGP00000019974 | ENSGAGP00000017897 | Ubiquitin-like domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.953 |
ENSGAGP00000019974 | ENSGAGP00000021506 | ENSGAGP00000019974 | ENSGAGP00000021506 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.598 |
ENSGAGP00000019974 | ENSGAGP00000023227 | ENSGAGP00000019974 | ENSGAGP00000023227 | Ubiquitin-like domain-containing protein. | Pyrin domain-containing protein. | 0.495 |
ENSGAGP00000019974 | GAS7 | ENSGAGP00000019974 | ENSGAGP00000032617 | Ubiquitin-like domain-containing protein. | Growth arrest specific 7. | 0.854 |
ENSGAGP00000019974 | UBA52 | ENSGAGP00000019974 | ENSGAGP00000001883 | Ubiquitin-like domain-containing protein. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.999 |
ENSGAGP00000019974 | UBE2L5 | ENSGAGP00000019974 | ENSGAGP00000021852 | Ubiquitin-like domain-containing protein. | Ubiquitin conjugating enzyme E2 L5; Belongs to the ubiquitin-conjugating enzyme family. | 0.977 |
ENSGAGP00000019974 | ZFAND4 | ENSGAGP00000019974 | ENSGAGP00000014905 | Ubiquitin-like domain-containing protein. | Zinc finger AN1-type containing 4. | 0.999 |
ENSGAGP00000021506 | AGO2 | ENSGAGP00000021506 | ENSGAGP00000004761 | Uncharacterized protein. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.598 |
ENSGAGP00000021506 | ENSGAGP00000017897 | ENSGAGP00000021506 | ENSGAGP00000017897 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.493 |
ENSGAGP00000021506 | ENSGAGP00000019974 | ENSGAGP00000021506 | ENSGAGP00000019974 | Uncharacterized protein. | Ubiquitin-like domain-containing protein. | 0.598 |
ENSGAGP00000021506 | ENSGAGP00000023227 | ENSGAGP00000021506 | ENSGAGP00000023227 | Uncharacterized protein. | Pyrin domain-containing protein. | 0.489 |
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