STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPC2Small nuclear RNA activating complex polypeptide 2. (401 aa)    
Predicted Functional Partners:
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
 0.959
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
 0.892
SNAPC5
Small nuclear RNA activating complex polypeptide 5.
     
 0.863
TBPL2
TATA-box binding protein like 2.
    
 0.652
TBP
TATA-box binding protein.
    
 0.652
CRCP
CGRP receptor component.
   
 
 0.648
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
     
 0.640
POLR3D
RNA polymerase III subunit D.
     
 0.633
POLR3E
RNA polymerase III subunit E.
     
 0.632
POLR3H
RNA polymerase III subunit H.
     
 0.619
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.