STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000023233Bap31 domain-containing protein. (158 aa)    
Predicted Functional Partners:
ENSGAGP00000026930
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.675
CASP10
Caspase 10; Belongs to the peptidase C14A family.
   
 0.675
CASP8
Caspase 8; Belongs to the peptidase C14A family.
   
 0.675
VAPB
MSP domain-containing protein.
   
 0.644
VAPB-2
VAMP associated protein B and C.
   
 0.644
VAPA
VAMP associated protein A.
   
 0.636
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.621
DNM1L
Dynamin 1 like; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.615
ENSGAGP00000036275
Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.615
MOSPD1
Motile sperm domain containing 1.
   
 0.590
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.