STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP2U1Cytochrome P450 family 2 subfamily U member 1. (318 aa)    
Predicted Functional Partners:
PLA2G3
Phospholipase A2 group III.
    
 0.850
ENSGAGP00000022818
PA2c domain-containing protein.
    
 0.850
PLA2G6
Phospholipase A2 group VI.
    
 0.849
ENSGAGP00000035318
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 
0.829
PLA2G4F
Phospholipase A2.
     
 0.828
ENSGAGP00000015948
LRAT domain-containing protein.
    
  0.828
ALOX5
Arachidonate 5-lipoxygenase.
    
  0.828
ENSGAGP00000034833
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 
0.827
PLA2G4A
Phospholipase A2.
    
 0.826
ASMTL
Acetylserotonin O-methyltransferase like.
     
 0.824
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.