ENSGAGP00000026114 protein (Gopherus agassizii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSGAGP00000026114

SERPIN domain-containing protein; Belongs to the serpin family. (379 aa)

Predicted Functional Partners:

ENSGAGP00000014438

0.803

HGFAC

0.674

PROC

0.673

PLAT

0.655

ENSGAGP00000036151

0.654

ENSGAGP00000022669

0.626

ENSGAGP00000001588

0.600

ENSGAGP00000010525

0.600

ENSGAGP00000010535

0.600

F7

0.600

Your Current Organism:

Gopherus agassizii

NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSGAGP00000001588	ENSGAGP00000014438	ENSGAGP00000001588	ENSGAGP00000014438	Uncharacterized protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.877
ENSGAGP00000001588	ENSGAGP00000026114	ENSGAGP00000001588	ENSGAGP00000026114	Uncharacterized protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.600
ENSGAGP00000001588	HGFAC	ENSGAGP00000001588	ENSGAGP00000020202	Uncharacterized protein.	HGF activator.	0.574
ENSGAGP00000001588	PROC	ENSGAGP00000001588	ENSGAGP00000001595	Uncharacterized protein.	Protein C, inactivator of coagulation factors Va and VIIIa.	0.645
ENSGAGP00000010525	ENSGAGP00000014438	ENSGAGP00000010525	ENSGAGP00000014438	Uncharacterized protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.876
ENSGAGP00000010525	ENSGAGP00000026114	ENSGAGP00000010525	ENSGAGP00000026114	Uncharacterized protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.600
ENSGAGP00000010525	HGFAC	ENSGAGP00000010525	ENSGAGP00000020202	Uncharacterized protein.	HGF activator.	0.575
ENSGAGP00000010525	PROC	ENSGAGP00000010525	ENSGAGP00000001595	Uncharacterized protein.	Protein C, inactivator of coagulation factors Va and VIIIa.	0.658
ENSGAGP00000010535	ENSGAGP00000014438	ENSGAGP00000010535	ENSGAGP00000014438	Uncharacterized protein.	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	0.875
ENSGAGP00000010535	ENSGAGP00000026114	ENSGAGP00000010535	ENSGAGP00000026114	Uncharacterized protein.	SERPIN domain-containing protein; Belongs to the serpin family.	0.600
ENSGAGP00000010535	HGFAC	ENSGAGP00000010535	ENSGAGP00000020202	Uncharacterized protein.	HGF activator.	0.572
ENSGAGP00000010535	PROC	ENSGAGP00000010535	ENSGAGP00000001595	Uncharacterized protein.	Protein C, inactivator of coagulation factors Va and VIIIa.	0.643
ENSGAGP00000014438	ENSGAGP00000001588	ENSGAGP00000014438	ENSGAGP00000001588	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.877
ENSGAGP00000014438	ENSGAGP00000010525	ENSGAGP00000014438	ENSGAGP00000010525	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.876
ENSGAGP00000014438	ENSGAGP00000010535	ENSGAGP00000014438	ENSGAGP00000010535	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.875
ENSGAGP00000014438	ENSGAGP00000026114	ENSGAGP00000014438	ENSGAGP00000026114	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	SERPIN domain-containing protein; Belongs to the serpin family.	0.803
ENSGAGP00000014438	ENSGAGP00000036151	ENSGAGP00000014438	ENSGAGP00000036151	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Uncharacterized protein.	0.758
ENSGAGP00000014438	F7	ENSGAGP00000014438	ENSGAGP00000010557	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Coagulation factor VII.	0.876
ENSGAGP00000014438	HGFAC	ENSGAGP00000014438	ENSGAGP00000020202	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	HGF activator.	0.708
ENSGAGP00000014438	PLAT	ENSGAGP00000014438	ENSGAGP00000026341	Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.	Plasminogen activator, tissue type.	0.485