STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STAG1Stromal antigen 1. (1258 aa)    
Predicted Functional Partners:
SMC1B
Structural maintenance of chromosomes protein.
   
 0.989
SMC3
Structural maintenance of chromosomes protein.
   
 0.984
RAD21
RAD21 cohesin complex component.
   
 0.971
NIPBL
Nipped-B protein.
   
 0.960
ENSGAGP00000012131
Uncharacterized protein.
   
 0.939
ENSGAGP00000012132
Rad21_Rec8 domain-containing protein.
   
 0.939
PDS5A
PDS5 cohesin associated factor A.
   
 0.931
PDS5B
PDS5 cohesin associated factor B.
   
 0.931
WAPL
WAPL cohesin release factor.
   
 0.889
SMC6
Structural maintenance of chromosomes 6.
   
 0.889
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.