STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF9Cdc42 guanine nucleotide exchange factor 9. (602 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.956
APC2
APC regulator of WNT signaling pathway 2.
    
 0.820
ENSGAGP00000019356
APC_N_CC domain-containing protein.
    
 0.820
APC
APC regulator of WNT signaling pathway.
    
 0.820
RAC1
Rac family small GTPase 1.
    
 0.810
RAC2
Rac family small GTPase 2.
    
 0.810
RAC3
Rac family small GTPase 3.
    
 0.810
GABRA2
Gamma-aminobutyric acid type A receptor alpha2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.781
GNB5
G protein subunit beta 5.
    
 0.758
GNB3
G protein subunit beta 3.
    
 0.758
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.