STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYVE1Lymphatic vessel endothelial hyaluronan receptor 1. (311 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
    
  0.829
ENSGAGP00000019109
PKcGMP_CC domain-containing protein.
   
 0.784
ENSGAGP00000023286
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.784
PRKG1
Protein kinase cGMP-dependent 1.
   
 0.784
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.761
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.761
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.761
CHP1
Calcineurin like EF-hand protein 1.
    
  0.688
ENSGAGP00000027504
Link domain-containing protein.
     
0.668
ENSGAGP00000013961
Uncharacterized protein.
    
  0.659
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.