STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCR5C-X-C motif chemokine receptor 5; Belongs to the G-protein coupled receptor 1 family. (372 aa)    
Predicted Functional Partners:
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.934
CXCL8-4
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.933
CCL5
C-C motif chemokine.
    
 0.925
ENSGAGP00000018841
C-C motif chemokine.
    
 0.922
CXCL8-3
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
     
 0.918
CXCL14
C-X-C motif chemokine ligand 14.
     
 0.884
ENSGAGP00000015370
C-C motif chemokine.
    
 0.883
ENSGAGP00000006666
C-C motif chemokine.
    
 0.866
CCR7
C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family.
  
 
0.866
ENSGAGP00000015634
C-C motif chemokine.
    
 0.863
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.