STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD40LGCD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. (260 aa)    
Predicted Functional Partners:
ENSGAGP00000025784
TNFR-Cys domain-containing protein.
    
 0.994
ICOS
Inducible T cell costimulator.
   
 
 0.940
ENSGAGP00000026769
TNFR-Cys domain-containing protein.
    
 0.935
FASLG
Fas ligand; Belongs to the tumor necrosis factor family.
   
 
0.902
ENSGAGP00000002404
Uncharacterized protein.
    
 0.880
TNC
Tenascin C.
    
   0.880
TNFRSF11B
Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis.
    
 0.880
ENSGAGP00000029155
TNFR-Cys domain-containing protein.
    
 0.880
ENSGAGP00000029158
Uncharacterized protein.
    
 0.880
FAS
Fas cell surface death receptor.
   
 
 0.878
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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