Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD40LG | ENSGAGP00000002404 | ENSGAGP00000029037 | ENSGAGP00000002404 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Uncharacterized protein. | 0.880 |
CD40LG | ENSGAGP00000025784 | ENSGAGP00000029037 | ENSGAGP00000025784 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNFR-Cys domain-containing protein. | 0.994 |
CD40LG | ENSGAGP00000026769 | ENSGAGP00000029037 | ENSGAGP00000026769 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNFR-Cys domain-containing protein. | 0.935 |
CD40LG | ENSGAGP00000029155 | ENSGAGP00000029037 | ENSGAGP00000029155 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | TNFR-Cys domain-containing protein. | 0.880 |
CD40LG | ENSGAGP00000029158 | ENSGAGP00000029037 | ENSGAGP00000029158 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Uncharacterized protein. | 0.880 |
CD40LG | FAS | ENSGAGP00000029037 | ENSGAGP00000029103 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Fas cell surface death receptor. | 0.878 |
CD40LG | FASLG | ENSGAGP00000029037 | ENSGAGP00000031690 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Fas ligand; Belongs to the tumor necrosis factor family. | 0.902 |
CD40LG | ICOS | ENSGAGP00000029037 | ENSGAGP00000019264 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Inducible T cell costimulator. | 0.940 |
CD40LG | TNC | ENSGAGP00000029037 | ENSGAGP00000015285 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tenascin C. | 0.880 |
CD40LG | TNFRSF11B | ENSGAGP00000029037 | ENSGAGP00000027711 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.880 |
ENSGAGP00000002404 | CD40LG | ENSGAGP00000002404 | ENSGAGP00000029037 | Uncharacterized protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.880 |
ENSGAGP00000025784 | CD40LG | ENSGAGP00000025784 | ENSGAGP00000029037 | TNFR-Cys domain-containing protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.994 |
ENSGAGP00000025784 | FAS | ENSGAGP00000025784 | ENSGAGP00000029103 | TNFR-Cys domain-containing protein. | Fas cell surface death receptor. | 0.508 |
ENSGAGP00000025784 | FASLG | ENSGAGP00000025784 | ENSGAGP00000031690 | TNFR-Cys domain-containing protein. | Fas ligand; Belongs to the tumor necrosis factor family. | 0.684 |
ENSGAGP00000025784 | ICOS | ENSGAGP00000025784 | ENSGAGP00000019264 | TNFR-Cys domain-containing protein. | Inducible T cell costimulator. | 0.581 |
ENSGAGP00000026769 | CD40LG | ENSGAGP00000026769 | ENSGAGP00000029037 | TNFR-Cys domain-containing protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.935 |
ENSGAGP00000026769 | FASLG | ENSGAGP00000026769 | ENSGAGP00000031690 | TNFR-Cys domain-containing protein. | Fas ligand; Belongs to the tumor necrosis factor family. | 0.996 |
ENSGAGP00000026769 | TNFRSF11B | ENSGAGP00000026769 | ENSGAGP00000027711 | TNFR-Cys domain-containing protein. | Tumor necrosis factor receptor superfamily member 11B; Acts as decoy receptor for TNFSF11/RANKL and thereby neutralizes its function in osteoclastogenesis. | 0.775 |
ENSGAGP00000029155 | CD40LG | ENSGAGP00000029155 | ENSGAGP00000029037 | TNFR-Cys domain-containing protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.880 |
ENSGAGP00000029158 | CD40LG | ENSGAGP00000029158 | ENSGAGP00000029037 | Uncharacterized protein. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.880 |
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