STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEUROG1Neurogenin 1. (195 aa)    
Predicted Functional Partners:
ENSGAGP00000033667
Uncharacterized protein.
    
 0.702
HES1
Hes family bHLH transcription factor 1.
    
 0.702
ENSGAGP00000009616
Orange domain-containing protein.
    
 0.657
INSM1
INSM transcriptional repressor 1.
   
 0.606
INSM2
INSM transcriptional repressor 2.
   
 0.606
NKX2-2
NK2 homeobox 2.
   
 0.588
PAX6
Paired box 6.
   
 
 0.577
HES2
Hes family bHLH transcription factor 2.
    
 0.512
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 
 0.488
TCF12
Transcription factor 12.
    
 
 0.482
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.