STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORT1Sortilin. (838 aa)    
Predicted Functional Partners:
NTS
Neurotensin.
    
 
 0.983
GAK
Cyclin G associated kinase.
     
 0.971
SORCS2
Sortilin related VPS10 domain containing receptor 2.
    
0.927
SORCS1
Sortilin related VPS10 domain containing receptor 1.
  
 
0.913
SORCS3
Sortilin related VPS10 domain containing receptor 3.
    
0.907
PSMA4
Proteasome subunit alpha type.
    
 
 0.883
PSMB5
Proteasome subunit beta.
    
   0.880
ENSGAGP00000030166
Proteasome subunit alpha type.
    
   0.880
ENSGAGP00000000754
Vitellogenin domain-containing protein.
     
 0.863
ENSGAGP00000030507
ApoB100_C domain-containing protein.
     
 0.863
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.