STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF12Rho guanine nucleotide exchange factor 12. (1542 aa)    
Predicted Functional Partners:
GNA12
G protein subunit alpha 12.
    
 0.946
ENSGAGP00000023196
Uncharacterized protein.
   
 0.928
RHOA
Ras homolog family member A.
   
 0.928
ENSGAGP00000002981
Uncharacterized protein.
    
 0.908
ENSGAGP00000036236
Uncharacterized protein.
    
 0.908
ENSGAGP00000028580
Uncharacterized protein.
   
 0.881
MRAS
Muscle RAS oncogene homolog.
    
 0.867
ENSGAGP00000027353
Uncharacterized protein.
    
  0.865
RND1
Rho family GTPase 1.
   
 0.862
ENSGAGP00000023200
Uncharacterized protein.
   
 0.856
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.