STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000032973Uncharacterized protein. (1325 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
   
 0.980
TJP3
Tight junction protein 3; Belongs to the MAGUK family.
   
 0.941
ENSGAGP00000001813
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.934
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.913
AKAP13
A-kinase anchoring protein 13.
     
 0.837
ARHGEF28
Rho guanine nucleotide exchange factor 28.
     
 0.837
GATA3
GATA binding protein 3.
     
 0.769
GATA4
Uncharacterized protein.
     
 0.755
ENSGAGP00000009053
GATA-N domain-containing protein.
     
 0.755
GATA5
GATA binding protein 5.
     
 0.755
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.