STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL5Kelch like family member 5. (708 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.892
SQSTM1
Sequestosome 1.
    
 0.850
ENSGAGP00000008561
BBS1 domain-containing protein.
    
 0.815
BBS9
Bardet-Biedl syndrome 9.
    
 0.813
BBS4
Bardet-Biedl syndrome 4.
    
 0.803
TTC8
Tetratricopeptide repeat domain 8.
    
 0.793
RBX1
Ring-box 1.
    
 0.788
NFE2L3
Nuclear factor, erythroid 2 like 3.
    
 0.752
NFE2
Nuclear factor, erythroid 2.
    
 0.752
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.752
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.