Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BOP1 | DDX54 | ENSGAGP00000017098 | ENSGAGP00000031745 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | 0.955 |
BOP1 | GRWD1 | ENSGAGP00000017098 | ENSGAGP00000011625 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Glutamate rich WD repeat containing 1. | 0.955 |
BOP1 | NAT10 | ENSGAGP00000017098 | ENSGAGP00000006914 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.885 |
BOP1 | RPF2 | ENSGAGP00000017098 | ENSGAGP00000022087 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome production factor 2 homolog. | 0.986 |
BOP1 | TBL3 | ENSGAGP00000017098 | ENSGAGP00000033758 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Transducin beta like 3. | 0.918 |
BOP1 | TRMT2A | ENSGAGP00000017098 | ENSGAGP00000034139 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | tRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.846 |
BOP1 | TRMT61A | ENSGAGP00000017098 | ENSGAGP00000020542 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.857 |
BOP1 | UTP18 | ENSGAGP00000017098 | ENSGAGP00000028285 | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | UTP18 small subunit processome component. | 0.958 |
CEP152 | DDX54 | ENSGAGP00000011149 | ENSGAGP00000031745 | Centrosomal protein 152. | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | 0.955 |
CEP152 | GRWD1 | ENSGAGP00000011149 | ENSGAGP00000011625 | Centrosomal protein 152. | Glutamate rich WD repeat containing 1. | 0.944 |
CEP152 | NAT10 | ENSGAGP00000011149 | ENSGAGP00000006914 | Centrosomal protein 152. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.885 |
CEP152 | RPF2 | ENSGAGP00000011149 | ENSGAGP00000022087 | Centrosomal protein 152. | Ribosome production factor 2 homolog. | 0.986 |
CEP152 | TBL3 | ENSGAGP00000011149 | ENSGAGP00000033758 | Centrosomal protein 152. | Transducin beta like 3. | 0.908 |
CEP152 | TRMT2A | ENSGAGP00000011149 | ENSGAGP00000034139 | Centrosomal protein 152. | tRNA methyltransferase 2 homolog A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.846 |
CEP152 | TRMT61A | ENSGAGP00000011149 | ENSGAGP00000020542 | Centrosomal protein 152. | tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA. | 0.857 |
CEP152 | UTP18 | ENSGAGP00000011149 | ENSGAGP00000028285 | Centrosomal protein 152. | UTP18 small subunit processome component. | 0.943 |
DDX54 | BOP1 | ENSGAGP00000031745 | ENSGAGP00000017098 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.955 |
DDX54 | CEP152 | ENSGAGP00000031745 | ENSGAGP00000011149 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Centrosomal protein 152. | 0.955 |
DDX54 | GRWD1 | ENSGAGP00000031745 | ENSGAGP00000011625 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | Glutamate rich WD repeat containing 1. | 0.873 |
DDX54 | NAT10 | ENSGAGP00000031745 | ENSGAGP00000006914 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.915 |
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