STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF5TATA-box binding protein associated factor 5. (771 aa)    
Predicted Functional Partners:
TAF12
TATA-box binding protein associated factor 12.
   
 0.992
TAF6
TATA-box binding protein associated factor 6.
   
 0.991
TAF2
TATA-box binding protein associated factor 2.
    
 0.990
ENSGAGP00000003743
TAFII28 domain-containing protein.
    
 0.990
TAF9
TATA-box binding protein associated factor 9.
    
 0.990
TAF7
TATA-box binding protein associated factor 7.
    
 0.990
TAF8
TATA-box binding protein associated factor 8.
    
 0.990
ENSGAGP00000035751
Transcription initiation factor TFIID subunit.
    
 0.989
TAF13
TATA-box binding protein associated factor 13.
    
 0.989
TADA3
Transcriptional adaptor 3.
    
 0.982
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.