STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (580 aa)    
Predicted Functional Partners:
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.828
SETD7
SET domain containing 7, histone lysine methyltransferase.
    
 0.809
ENSGAGP00000009929
SET domain-containing protein.
    
 0.803
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
   0.802
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.786
PRDM14
PR/SET domain 14.
    
 
0.744
SMYD1
SET and MYND domain containing 1.
    
 0.716
KMT5B
Lysine methyltransferase 5B.
     
 0.713
ENSGAGP00000024877
Uncharacterized protein.
     
 0.676
SMYD2
SET and MYND domain containing 2.
    
 0.675
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.