STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAGP00000035672Uncharacterized protein. (68 aa)    
Predicted Functional Partners:
PTGES3L
Prostaglandin E synthase 3 like.
  
 0.815
CYB5R4
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
  
 0.806
MCAT
Malonyl-CoA-acyl carrier protein transacylase.
  
 0.738
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.724
ENSGAGP00000028373
Peptidase_M24 domain-containing protein.
  
 0.665
ENSGAGP00000014007
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.663
ENSGAGP00000015563
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.663
FDX1
Ferredoxin 1.
  
 0.663
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
   
 0.656
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
   
 0.655
Your Current Organism:
Gopherus agassizii
NCBI taxonomy Id: 38772
Other names: G. agassizii, Gopherus agassizi, Gopherus polyphemus agassizii, USNM 7888, desert tortoise
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