MTR_1749s0010 protein (Medicago truncatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MTR_1749s0010

Disease resistance protein (TIR-NBS-LRR class). (166 aa)

Predicted Functional Partners:

G8A1T1_MEDTR

0.454

G7KPJ7_MEDTR

0.441

G7I3H1_MEDTR

0.418

A0A072ULY3

0.410

A0A072UK11

0.408

MTR_0373s0040

0.407

Your Current Organism:

Medicago truncatula

NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A072UK11	G7KPJ7_MEDTR	A0A072UK11	G7KPJ7	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR-NBS-LRR class disease resistance protein.	0.411
A0A072UK11	MTR_1749s0010	A0A072UK11	A0A072TD92	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	Disease resistance protein (TIR-NBS-LRR class).	0.408
A0A072ULY3	G7KPJ7_MEDTR	A0A072ULY3	G7KPJ7	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	TIR-NBS-LRR class disease resistance protein.	0.412
A0A072ULY3	MTR_1749s0010	A0A072ULY3	A0A072TD92	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	Disease resistance protein (TIR-NBS-LRR class).	0.410
G7I3H1_MEDTR	MTR_1749s0010	G7I3H1	A0A072TD92	Putative IQ motif, EF-hand binding protein.	Disease resistance protein (TIR-NBS-LRR class).	0.418
G7KPJ7_MEDTR	A0A072UK11	G7KPJ7	A0A072UK11	TIR-NBS-LRR class disease resistance protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.411
G7KPJ7_MEDTR	A0A072ULY3	G7KPJ7	A0A072ULY3	TIR-NBS-LRR class disease resistance protein.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.412
G7KPJ7_MEDTR	G8A1T1_MEDTR	G7KPJ7	G8A1T1	TIR-NBS-LRR class disease resistance protein.	Uncharacterized protein.	0.497
G7KPJ7_MEDTR	MTR_1749s0010	G7KPJ7	A0A072TD92	TIR-NBS-LRR class disease resistance protein.	Disease resistance protein (TIR-NBS-LRR class).	0.441
G8A1T1_MEDTR	G7KPJ7_MEDTR	G8A1T1	G7KPJ7	Uncharacterized protein.	TIR-NBS-LRR class disease resistance protein.	0.497
G8A1T1_MEDTR	MTR_0373s0040	G8A1T1	A0A072TGA9	Uncharacterized protein.	TIR-NBS-LRR class disease resistance protein.	0.486
G8A1T1_MEDTR	MTR_1749s0010	G8A1T1	A0A072TD92	Uncharacterized protein.	Disease resistance protein (TIR-NBS-LRR class).	0.454
MTR_0373s0040	G8A1T1_MEDTR	A0A072TGA9	G8A1T1	TIR-NBS-LRR class disease resistance protein.	Uncharacterized protein.	0.486
MTR_0373s0040	MTR_1749s0010	A0A072TGA9	A0A072TD92	TIR-NBS-LRR class disease resistance protein.	Disease resistance protein (TIR-NBS-LRR class).	0.407
MTR_1749s0010	A0A072UK11	A0A072TD92	A0A072UK11	Disease resistance protein (TIR-NBS-LRR class).	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.408
MTR_1749s0010	A0A072ULY3	A0A072TD92	A0A072ULY3	Disease resistance protein (TIR-NBS-LRR class).	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.410
MTR_1749s0010	G7I3H1_MEDTR	A0A072TD92	G7I3H1	Disease resistance protein (TIR-NBS-LRR class).	Putative IQ motif, EF-hand binding protein.	0.418
MTR_1749s0010	G7KPJ7_MEDTR	A0A072TD92	G7KPJ7	Disease resistance protein (TIR-NBS-LRR class).	TIR-NBS-LRR class disease resistance protein.	0.441
MTR_1749s0010	G8A1T1_MEDTR	A0A072TD92	G8A1T1	Disease resistance protein (TIR-NBS-LRR class).	Uncharacterized protein.	0.454
MTR_1749s0010	MTR_0373s0040	A0A072TD92	A0A072TGA9	Disease resistance protein (TIR-NBS-LRR class).	TIR-NBS-LRR class disease resistance protein.	0.407