STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTR_0227s0030Transmembrane protein, putative. (417 aa)    
Predicted Functional Partners:
A0A072UGW9
Putative uracil phosphoribosyltransferase.
     
  0.900
G7KJU9_MEDTR
Homotetrameric cytidine deaminase.
     
  0.900
G7KJV4_MEDTR
Ectonucleotide pyrophosphatase/phosphodiesterase.
     
  0.900
G7L609_MEDTR
Inosine-uridine preferring nucleoside hydrolase.
     
  0.900
G7LD78_MEDTR
Uridylate kinase.
     
  0.900
G7LJJ3_MEDTR
Ectonucleotide pyrophosphatase/phosphodiesterase.
     
  0.900
G7LJJ4_MEDTR
Homotetrameric cytidine deaminase.
     
  0.900
A0A072UI20
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
     
  0.650
A0A072V4E2
Uridine 5-monophosphate synthase-like protein.
     
  0.650
B7FMF1_MEDTR
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
     
  0.650
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.