STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTR_0154s0020MAP3K-like kinase; Belongs to the protein kinase superfamily. (335 aa)    
Predicted Functional Partners:
A0A072TZX1
Structural maintenance of chromosomes protein.
   
 0.991
A0A072VHH5
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
 0.989
G7J9C1_MEDTR
Chromosome condensation-like protein.
   
 0.988
G7KTI1_MEDTR
Structural maintenance of chromosomes protein.
   
 0.950
G7KTI2_MEDTR
Structural maintenance of chromosomes protein.
   
 0.950
G7L8M1_MEDTR
Structural maintenance of chromosomes protein.
   
 0.950
A0A072UR46
Uncharacterized protein.
   
 0.731
A0A072V1W4
Structural maintenance of chromosomes protein.
   
 0.731
A0A072V3S6
Structural maintenance of chromosomes protein.
   
 0.731
A0A072VIT6
Structural maintenance of chromosomes protein.
   
 0.731
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.