STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTR_0031s0060Amino acid permease. (668 aa)    
Predicted Functional Partners:
A0A072TQ25
Cationic amino acid transporter.
  
 
 
 0.773
A0A072UP38
Cationic amino acid transporter.
  
 
 
 0.773
A0A072VQJ0
Putative amino acid/polyamine transporter I, cationic amino acid transporter.
  
 
 
 0.773
G7INC3_MEDTR
Putative amino acid/polyamine transporter I, cationic amino acid transporter.
  
 
 
 0.772
A0A072TXI5
Cationic amino acid transporter.
  
 
 
 0.771
A0A072VEU9
Putative amino acid/polyamine transporter I, cationic amino acid transporter.
  
 
 
 0.770
G7L9L8_MEDTR
Cationic amino acid transporter.
  
 
 
 0.768
A0A072TV27
Cationic amino acid transporter.
  
 
 
 0.760
A0A072TMC9
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
    
 0.528
A0A072TSJ2
Alpha amylase domain protein.
    
 0.528
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.