STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TKT3Autophagocytosis-associated family protein. (235 aa)    
Predicted Functional Partners:
A0A072TLU6
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
    
 0.994
MTR_0003s0540
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
 0.962
G7KFU3_MEDTR
Autophagy protein 5; Required for autophagy.
    
 0.862
A0A072UPL7
PB1-Joka2 domain protein.
      
 0.745
A0A072UPY6
Putative PB1 domain-containing protein.
      
 0.745
A0A072UPZ4
PB1 domain protein.
      
 0.745
A0A072UQZ7
PB1 domain protein.
      
 0.745
A0A072UR03
PB1-Joka2 domain protein.
      
 0.745
A0A072URU5
PB1 domain protein.
      
 0.745
A0A072V0X9
Ubiquitin-associated/TS-N domain protein, putative.
      
 0.745
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (12%) [HD]