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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TMC5Putative response regulator and transcription factor RR-A-type family. (640 aa)    
Predicted Functional Partners:
G7J905_MEDTR
PRR response regulator.
  
 
0.930
G7L550_MEDTR
Putative response regulator and transcription factor RR-A-type family.
  
  
 
0.905
G7LBF6_MEDTR
Putative F-box domain, galactose oxidase/kelch, beta-propeller, kelch-type beta propeller.
   
 
 0.875
G7IAC4_MEDTR
Putative transcription factor bHLH family.
    
 
 0.861
G7KUN6_MEDTR
Helix loop helix DNA-binding domain protein.
    
 
 0.805
G7IBU3_MEDTR
Gigantea protein 1B.
    
 
 0.727
G7KVK4_MEDTR
Putative transcription factor bHLH family.
    
 
 0.705
A0A072TUQ4
Putative F-box domain, galactose oxidase, beta-propeller.
      
 0.684
A0A072U263
Putative galactose oxidase, beta-propeller.
      
 0.684
A0A072U6S3
Putative galactose oxidase, beta-propeller.
      
 0.684
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.