STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TMT1RING zinc finger protein. (687 aa)    
Predicted Functional Partners:
A0A072TYP8
Cell division control-like protein.
   
  
 0.650
A0A072VQ67
Divergent CCT motif protein.
   
 
 0.646
G7L437_MEDTR
Putative Sde2 domain-containing protein.
     
 0.591
G7II90_MEDTR
Putative DNA-formamidopyrimidine glycosylase, DNA-(Apurinic or apyrimidinic site) lyase.
   
  
 0.576
A0A072VA32
Putative E3 SUMO-protein ligase Nse2 (Mms21).
      
 0.520
MTR_0003s0540
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
     
 0.509
G7JHZ9_MEDTR
Putative E2 binding, NAD(P)-binding domain, ubiquitin activating enzyme, alpha.
     
 0.509
A0A072V7Q0
DNA replication complex GINS SLD5-like protein.
   
 
 0.493
G7J8I4_MEDTR
Putative Zinc finger, Mcm10/DnaG-type.
   
  
 0.480
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
    
 
 0.477
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.