Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TN25Uncharacterized protein. (79 aa)    
Predicted Functional Partners:
G7KTL4_MEDTR
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
      
 0.578
A0A072UBH4
Adenosine/AMP deaminase.
      
 0.514
A0A072VD81
Metalloendopeptidase/zinc ion-binding protein.
      
 0.514
A0A072VF64
Metalloendopeptidase/zinc ion-binding protein.
      
 0.514
G7JQ45_MEDTR
Putative hydrolase.
      
 0.514
B7FHD5_MEDTR
Thylakoid lumenal 17.4 kDa protein.
      
 0.483
G7I3Z0_MEDTR
Putative ureidoglycolate amidohydrolase.
      
 0.453
A2Q4T2_MEDTR
Adenylosuccinate lyase, putative.
      
 0.412
G7KBW0_MEDTR
Adenylosuccinate lyase.
      
 0.412
G7KUI6_MEDTR
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.412
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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