A0A072TP82 protein (Medicago truncatula) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A072TP82

LRR receptor-like kinase. (838 aa)

Predicted Functional Partners:

A0A072VL08

0.690

A7KH81_MEDTR

0.690

G7I7D1_MEDTR

0.690

G7IBV9_MEDTR

0.690

G7IRJ4_MEDTR

0.690

G7JF16_MEDTR

0.690

G7JVA6_MEDTR

0.690

G7JZ30_MEDTR

0.690

G7L8C5_MEDTR

0.690

NIP1

0.680

Your Current Organism:

Medicago truncatula

NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A072TP82	A0A072VL08	A0A072TP82	A0A072VL08	LRR receptor-like kinase.	GRAS family transcription factor; Belongs to the GRAS family.	0.690
A0A072TP82	A7KH81_MEDTR	A0A072TP82	A7KH81	LRR receptor-like kinase.	Nodule Cysteine-Rich (NCR) secreted peptide.	0.690
A0A072TP82	G7I7D1_MEDTR	A0A072TP82	G7I7D1	LRR receptor-like kinase.	Putative major facilitator superfamily domain-containing protein.	0.690
A0A072TP82	G7IBV9_MEDTR	A0A072TP82	G7IBV9	LRR receptor-like kinase.	Cyclin-dependent kinase.	0.690
A0A072TP82	G7IRJ4_MEDTR	A0A072TP82	G7IRJ4	LRR receptor-like kinase.	GRAS family transcription factor; Belongs to the GRAS family.	0.690
A0A072TP82	G7JF16_MEDTR	A0A072TP82	G7JF16	LRR receptor-like kinase.	ABC transporter B family protein.	0.690
A0A072TP82	G7JVA6_MEDTR	A0A072TP82	G7JVA6	LRR receptor-like kinase.	Early nodulin-93.	0.690
A0A072TP82	G7JZ30_MEDTR	A0A072TP82	G7JZ30	LRR receptor-like kinase.	Inhibitor of trypsin and hageman factor-like protein.	0.690
A0A072TP82	G7L8C5_MEDTR	A0A072TP82	G7L8C5	LRR receptor-like kinase.	Putative xenobiotic-transporting ATPase.	0.690
A0A072TP82	NIP1	A0A072TP82	Q8W4T7	LRR receptor-like kinase.	Major intrinsic protein (MIP) family transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.680
A0A072VL08	A0A072TP82	A0A072VL08	A0A072TP82	GRAS family transcription factor; Belongs to the GRAS family.	LRR receptor-like kinase.	0.690
A0A072VL08	A7KH81_MEDTR	A0A072VL08	A7KH81	GRAS family transcription factor; Belongs to the GRAS family.	Nodule Cysteine-Rich (NCR) secreted peptide.	0.690
A0A072VL08	G7I7D1_MEDTR	A0A072VL08	G7I7D1	GRAS family transcription factor; Belongs to the GRAS family.	Putative major facilitator superfamily domain-containing protein.	0.690
A0A072VL08	G7IBV9_MEDTR	A0A072VL08	G7IBV9	GRAS family transcription factor; Belongs to the GRAS family.	Cyclin-dependent kinase.	0.689
A0A072VL08	G7JF16_MEDTR	A0A072VL08	G7JF16	GRAS family transcription factor; Belongs to the GRAS family.	ABC transporter B family protein.	0.690
A0A072VL08	G7JVA6_MEDTR	A0A072VL08	G7JVA6	GRAS family transcription factor; Belongs to the GRAS family.	Early nodulin-93.	0.690
A0A072VL08	G7JZ30_MEDTR	A0A072VL08	G7JZ30	GRAS family transcription factor; Belongs to the GRAS family.	Inhibitor of trypsin and hageman factor-like protein.	0.690
A0A072VL08	G7L8C5_MEDTR	A0A072VL08	G7L8C5	GRAS family transcription factor; Belongs to the GRAS family.	Putative xenobiotic-transporting ATPase.	0.690
A0A072VL08	NIP1	A0A072VL08	Q8W4T7	GRAS family transcription factor; Belongs to the GRAS family.	Major intrinsic protein (MIP) family transporter; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.680
A7KH81_MEDTR	A0A072TP82	A7KH81	A0A072TP82	Nodule Cysteine-Rich (NCR) secreted peptide.	LRR receptor-like kinase.	0.690