STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TPV2Ubiquitin-protein ligase, putative. (103 aa)    
Predicted Functional Partners:
B7FGN8_MEDTR
Ubiquitin-40S ribosomal S27a-like protein.
    
 0.603
G7JHA9_MEDTR
Uncharacterized protein.
    
 0.603
G7K080_MEDTR
Ubiquitin-40S ribosomal S27a-like protein.
    
 0.603
G7KFT0_MEDTR
Ubiquitin-like Rad60 SUMO-like protein.
    
 0.603
G7KFT2_MEDTR
Ubiquitin-60S ribosomal protein.
    
 0.603
G7IAH0_MEDTR
Putative bifunctional inhibitor/plant lipid transfer protein/seed storage helical.
  
 
  0.535
G7JW98_MEDTR
Uncharacterized protein.
  
 
  0.529
A0A072VL05
Transmembrane protein, putative.
  
 
  0.525
A0A072VWM6
Transmembrane protein, putative.
  
 
  0.522
G7JRZ2_MEDTR
Extracellular calcium sensing receptor, putative.
  
 0.509
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.