Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A072TSH8Putative histone-lysine N-methyltransferase chromatin remodeling SET family. (533 aa)    
Predicted Functional Partners:
A0A072TWZ1
Uncharacterized protein.
    
 0.928
G7KNY7_MEDTR
Putative cGMP-dependent protein kinase AGC-PKA-PKG family.
    
 0.906
A0A072VEI5
Putative transcription factor WD40-like family.
    
 0.889
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
    
 0.882
A0A072V3N9
High mobility group B-like protein.
    
 0.861
G7J0D1_MEDTR
Putative transcription factor & chromatin remodeling ARID-HMG family.
    
 0.861
G7IF34_MEDTR
Putative transcription factor & chromatin remodeling ARID-HMG family.
    
 0.859
G7K4J6_MEDTR
ARID/bright DNA-binding domain protein.
    
 0.859
G7KBS3_MEDTR
Putative transcription factor C2C2-YABBY family.
    
 0.859
G7KWP7_MEDTR
High mobility group B-like protein.
    
 0.859
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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