Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TST1Wall associated kinase-like protein. (697 aa)    
Predicted Functional Partners:
G7JGT3_MEDTR
Replication termination factor 2.
    
 
 0.650
A0A072V8V6
DELLA domain GRAS family transcription factor GAI; Belongs to the GRAS family.
      
 0.515
G7JQK2_MEDTR
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.510
G7K9A0_MEDTR
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.510
A0A072VND8
Putative oligopeptide transporter, OPT superfamily.
    
 
 0.501
I3SHV8_MEDTR
Putative LRAT-like domain-containing protein.
    
 0.494
A0A072UP92
Cadmium/zinc-transporting ATPase, putative.
      
 0.490
G7KWQ3_MEDTR
Methyltransferase.
    
 0.478
G7INC5_MEDTR
Putative tetratricopeptide-like helical domain-containing protein.
     
 0.428
G7KPL5_MEDTR
Transmembrane protein, putative.
      
 0.418
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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