STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTR_0085s0030HTAFII28-like motif protein. (160 aa)    
Predicted Functional Partners:
G7KSG1_MEDTR
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
   
 0.994
G7J9V2_MEDTR
Putative transcription factor WD40-like family.
    
 0.993
G7JA67_MEDTR
Transcription initiation factor TFIID subunit-like protein.
    
 0.993
G7K6S4_MEDTR
Transcription initiation factor TFIID protein, putative.
    
 0.993
G7J040_MEDTR
Putative transcription factor Hap3/NF-YB family.
    
 0.988
G7KXV7_MEDTR
Transcription initiation factor TFIID subunit-like protein.
    
 0.988
B7FH99_MEDTR
Putative transcription factor Hap3/NF-YB family.
    
 0.987
A0A072U741
Uncharacterized protein.
   
 0.983
A0A072V2Q4
Transcription initiation factor IID, 31 kDa subunit.
   
 0.983
G7IVW0_MEDTR
Transcription initiation factor IID, 31 kDa subunit.
   
 0.983
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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