STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TTQ2Lipid transfer protein. (113 aa)    
Predicted Functional Partners:
A0A072V0B7
Amine oxidase; Belongs to the copper/topaquinone oxidase family.
  
     0.476
A0A072VJH5
Carboxy-terminal region remorin.
  
     0.472
G7KXC3_MEDTR
Peptide transporter PTR2, putative.
  
     0.472
A0A072V8D7
Epidermal patterning factor.
  
     0.469
A2Q3K8_MEDTR
Carboxy-terminal region remorin.
  
     0.464
A0A072VQ06
DUF581 family protein.
  
     0.463
A0A072VQ19
Uncharacterized protein.
  
     0.463
Q2HVX1_MEDTR
Putative PLAT/LH2 domain-containing protein.
  
     0.463
G7J5B2_MEDTR
Putative F-box domain-containing protein.
  
     0.460
G7L6K1_MEDTR
Crooked neck protein, putative.
  
     0.460
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.