STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TWX7Transmembrane protein, putative. (69 aa)    
Predicted Functional Partners:
G7I805_MEDTR
Putative ERCC1/RAD10/SWI10 family, RuvA domain 2, restriction endonuclease type II.
   
 0.759
G8A181_MEDTR
Putative nuclear pore localization protein NPL4.
    
 0.747
A0A072VQ67
Divergent CCT motif protein.
   
 0.711
A0A072VPW0
Fanconi anemia, complementation group M protein.
    
 0.688
A0A072TWZ0
Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.
  
    0.585
A2Q1W0_MEDTR
Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase domain-containing protein.
    
 0.577
G7JYL5_MEDTR
Putative ERCC4 domain, RuvA domain 2, restriction endonuclease type II.
    
 0.577
G7JYM1_MEDTR
Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase domain-containing protein.
    
 0.577
B7FGL9_MEDTR
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.557
G7IBW2_MEDTR
Ribosomal protein L1p/L10e family protein.
   
 0.557
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.