STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072TY11Cullin 3B; Belongs to the cullin family. (196 aa)    
Predicted Functional Partners:
A0A072V3L0
Cullin-associated NEDD8-dissociated protein.
   
 0.784
G7JUI9_MEDTR
E3 ubiquitin-protein ligase PRT1-like protein, putative.
    
 0.696
G7L188_MEDTR
E3 ubiquitin-protein ligase PRT1-like protein.
    
 0.696
G7L190_MEDTR
Zinc finger, C3HC4 type (RING finger) protein.
    
 0.696
G7IKI7_MEDTR
Anaphase-promoting complex subunit 11 RING-H2 finger protein.
    
 0.694
I3T5Z4_MEDTR
Anaphase-promoting complex subunit 11 RING-H2 finger protein.
    
 0.694
G7L2Q4_MEDTR
COP9 signalosome complex subunit 2.
   
 0.625
MTR_0173s0030
COP9 signalosome complex subunit-like protein.
  
 
 0.609
A0A072VDB4
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.592
G7JTS6_MEDTR
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.592
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.