STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072U967Myb-like DNA-binding domain protein. (244 aa)    
Predicted Functional Partners:
G7KSG1_MEDTR
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 0.917
G7J9V2_MEDTR
Putative transcription factor WD40-like family.
   
 0.912
A0A072TY55
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.883
A0A072UNV5
Putative transcription factor WD40-like family.
   
 0.860
G7K577_MEDTR
Transducin family protein/WD-40 repeat protein.
   
 0.860
G7K578_MEDTR
Putative transcription factor WD40-like family.
   
 0.860
G7J040_MEDTR
Putative transcription factor Hap3/NF-YB family.
    
 0.834
G7KXV7_MEDTR
Transcription initiation factor TFIID subunit-like protein.
    
 0.834
G7JW74_MEDTR
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.819
G7K9P9_MEDTR
Transformation/transcription domain associated protein, putative.
   
 0.819
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.