STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072U9W8PPR repeat protein. (90 aa)    
Predicted Functional Partners:
A0A072VK38
Ribosomal RNA processing brix domain protein.
  
     0.539
G7IDU0_MEDTR
Myb-CC type transfactor, lheqle motif protein.
  
     0.539
G7I4T0_MEDTR
Embryo sac development arrest protein.
  
     0.537
G7KP12_MEDTR
Oligomeric subunit-like protein, putative.
  
     0.535
G7KPD7_MEDTR
Aspartyl protease-like protein, putative.
  
     0.535
G7JTC8_MEDTR
Putative sucrose synthase.
  
     0.534
A0A072VNH3
ARM repeat kinase family protein.
  
     0.533
G7KD25_MEDTR
SAUR-like auxin-responsive family protein.
  
     0.533
G7KFC5_MEDTR
50S ribosomal protein L18, putative.
  
     0.532
A0A072V162
DUF1645 family protein.
  
     0.528
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.