STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UAM0NBS-LRR type disease resistance protein; Belongs to the disease resistance NB-LRR family. (821 aa)    
Predicted Functional Partners:
A0A072TXB9
Putative RIN4, pathogenic type III effector avirulence factor Avr cleavage.
    
  0.902
A0A072TZJ4
RPM1 interacting protein 4 transcript protein.
    
  0.902
A0A072VEK4
NB-ARC domain disease resistance protein; Belongs to the disease resistance NB-LRR family.
  
  
 
0.901
G7ILR2_MEDTR
RPM1-interacting protein 4 (RIN4) family protein.
     
  0.900
G7L6L4_MEDTR
Brassinosteroid insensitive 1-associated receptor kinase; Belongs to the protein kinase superfamily.
    
 
 0.681
A0A072TNS5
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
      
 0.596
A0A072TXE1
Nucleoporin-like protein.
      
 0.596
A0A072V8X9
Nucleoporin-like protein.
      
 0.596
G7IZR4_MEDTR
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
      
 0.596
A0A072U5R5
Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs.
      
 0.595
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.