STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UBH0Putative High mobility group protein HMGA. (553 aa)    
Predicted Functional Partners:
A0A072VGU8
Putative SWI/SNF-like complex subunit BAF250/Osa protein.
    
 0.670
G7JR36_MEDTR
Chromatin structure-remodeling complex protein BSH.
    
 0.651
G7JY54_MEDTR
Putative DnaJ domain-containing protein.
    
 0.651
A0A072UI25
Putative transcription regulator SWI/SNF-BAF60b family.
    
 0.577
G7J5J5_MEDTR
Putative transcription regulator SWI/SNF-BAF60b family.
    
 0.577
G7JLF1_MEDTR
Putative transcription regulator SWI/SNF-BAF60b family.
    
 0.577
A0A072V3N9
High mobility group B-like protein.
   
 
 0.553
G7J0D1_MEDTR
Putative transcription factor & chromatin remodeling ARID-HMG family.
   
 
 0.553
G7IF34_MEDTR
Putative transcription factor & chromatin remodeling ARID-HMG family.
   
 
 0.536
G7K4J6_MEDTR
ARID/bright DNA-binding domain protein.
   
 
 0.536
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.