STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UBS6Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. (775 aa)    
Predicted Functional Partners:
A0A072U851
Squalene epoxidase.
  
 
 0.962
sqp1
Putative squalene monooxygenase.
  
 
 0.962
B7FHU0_MEDTR
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
   
 0.960
G7KF69_MEDTR
Squalene epoxidase.
  
 
 0.957
sqs1
Farnesyl-diphosphate farnesyltransferase.
 
  
 0.893
sqp2
Putative squalene monooxygenase.
  
 
 0.888
A0A072U9S9
Squalene monooxygenase.
  
 
 0.887
A0A072VFB7
Squalene epoxidase.
  
 
 0.887
G7JTY5_MEDTR
Putative squalene monooxygenase.
  
 
 0.886
CYP51G1
Cytochrome P450 monooxygenase CYP51G1; Belongs to the cytochrome P450 family.
  
 0.869
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.