Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A072UGK8Cyclin-dependent kinase; Belongs to the protein kinase superfamily. (311 aa)    
Predicted Functional Partners:
G7JM76_MEDTR
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.965
G7KRU4_MEDTR
Putative non-specific protein-tyrosine kinase WEE family; Belongs to the protein kinase superfamily.
   
 0.935
A0A072UXR1
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.929
G7JDY9_MEDTR
DNA helicase; Belongs to the MCM family.
   
 0.917
G7I3N6_MEDTR
Origin recognition complex second largest subunit 2.
   
 0.894
G7K258_MEDTR
Putative anaphase-promoting complex subunit 1.
    
 0.884
G7I853_MEDTR
Cyclin H, putative; Belongs to the cyclin family.
    
 0.882
A0A072UWC3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.880
G7L3X8_MEDTR
Rhodanese/cell cycle control phosphatase superfamily protein.
   
 0.875
G7IME2_MEDTR
Carboxy-terminal domain cyclin; Belongs to the cyclin family.
   
 0.874
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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